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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885673.1_cds_XP_016439747.1_35273
CDS Infomation

[gene=LOC107765593] [db_xref=GeneID:107765593] [protein=uncharacterized protein sll1770-like] [protein_id=XP_016439747.1] [location=join(27711..28271,28438..28581,28714..28839,29017..29104,29181..29274,29840..29933,30058..30112,30198..30289,30407..30577,31044..31100,31225..31308,32099..32183,32268..32329,32411..32485,32593..32697,32871..33012,33094..33167)] [gbkey=CDS]
Sequence

ATGGCGGCAATGTTGGCTTCTCAAAGCTGTTATTGCCGCAGAGGAGAACTGATAAATCAT
GGAAGTAATGTAAACAATCTCAGTTTTTCAGGCTCAATCTCTATACTATTTTTGTCGAAA
TATGATAAACAATCTGGTAAACCACCTAGAAAGATTCACCGGCTTAAAGTGCAAATGCAA
CAGACGGAGTCCCCTGAAAAAGTTGGTATAAATGGTCGTCCAGTTAAGATGGTACCTACA
AGTGAAGTTACAAAGAGAAAAGTGTCATCTGTAAATGGTGCTGAGATAGTCAATGGATCC
ACACAAAGAATTAATGGCGCAAGTATAGTTAAGCGAGCTGCTGCTCCTGCCCCTATGAAG
AAACAAAAATCTAAAGAACTTCCGCCCGTCGAAGATCTAAAGGTTTTACCTTCAGATGAA
GGTTTCAGCTGGGCTAATGAGAACTACAACTCAGTCCAAAGAAGTGTAGATGTGTGGTCC
TTTGTCCTTTCATTACGGGTTCGCGTATTCTTGGACAATGCAAAATGGACATATGTGGGA
GGCTTCACTGAAGATAAACAGAAAATCAGAAGACGTGGAACTGCGTCATGGTTAAGAGAA
TGTGTGCTTCAGCTTGGTCCTACTTTTATCAAACTTGGGCAGTTATCCTCTACTAGATCT
GATCTATTTCCTAGAGAATTTGTCGATGAGCTTGCTAAATTGCAGGACAGAGTACCTGCC
TTCTCCCCCAAGAAATCAAAAGAGTTTATTAAAAAGGAGCTGGGAGTTCCAGTTGATCTT
TTGTATAAAGAGTTTGAAGATCAACCCATTGCAGCAGCTAGTCTTGGTCAGGTGCATCGG
GCTATCTTACATAATGGAGAGAAAGTTGTTGTAAAAGTTCAGAGACCCGGTCTAAAGAAA
CTATTTGACATTGATCTGAAAAATTTAAAGTTGATTGCGGAGTACTTTCAGAAAAGTGAA
ACTCTTGGCGGTCCAACTCGGGACTGGATAGGAATATATGAAGAATGTGCTAAGATATTG
TATGAGGAAATCGATTATATAAATGAAGGGAAGAATGCTGATAGATTTCGCCGAGACTTT
CGCAATATAAAGTGGGTCCGAGTTCCTTTGGTATATTGGGACTATACAGCAACGAAGGTT
TTGACTCTTGAATATGTCCCAGGGATAAAGATCAACCAGTTGGATCTAATAGATGCACGG
GGTTATAGCAGATCCCGAATTGCGTCACGTGCCATTGAAGCCTACTTAATTCAGATACTG
AGGACTGGTTTTTTCCACGCTGATCCACATCCGGGAAATCTTGCAATTGACACTGACGAA
GCTTTAATCTATTATGACTTTGGTATGATGGGAGACATCAAGAGTTTCACAAGAGAGAGA
TTGTTGGGTGTTTTTTATGCTGTTTATGAAAAGGACGCGAAAAAGGTTATGCAAGGGCTA
ATTGATCTGGGAGCGCTTCAGCCTACAGGAGACATGTCAGCTGTGAGGAGATCTGTTCAG
TTTTTCTTAGATAACTTGTTGAATCAAAGACCAGATCAACAGCAGACTTTGTCTGCAATC
GGTGAGGATTTGTTTGCTATAGCAACTGATCAACCATTCCGTTTTCCTTCGACTTTTACA
TTTGTGCTCAGGGCATTTTCGACGCTTGAAGGAATCGGCTATATATTGGATCCTGATTTC
TCCTTCCCTAAGATTGCAGCACCATATGCACAGGAGCTCTTGGACTTGAGACAGAAACAG
AGAAGTGGTCCTCAGCTTGTTCAGGAAATAAGGAAGCAAGCCGATGATGCACGAACATAC
ACTATTTCCATGCCTTACAGAGTTCAGCGGATAGAAGAGATCGTTAAACAGCTTGAATCC
GGAGATTTGAAACTCAGAGTTAGGGTCCTTGAGTCCGAGAGAGCAGCTCGAAAAGCTACA
ATTCTTCAAATGGCGACCATGTACACAGTTATAGGGGGTACCCTCCTAAATCTTGGTGTC
ACATTTAGCAATCAAGGAAGTCAAATATTTGCAAATGGATCTTTTATTGGTGCAGGTGTT
TTCCTTGCTCTCTTTATTAGGTCCATGCAAAGAGTGAACAAACTTGATAAATTTGAGAAA
ATGATTTAA

Peptide Sequence

PEP ID

XP_016439747.1
PEP Infomation

PREDICTED: uncharacterized protein sll1770-like [Nicotiana tabacum]
Sequence

MAAMLASQSCYCRRGELINHGSNVNNLSFSGSISILFLSKYDKQSGKPPRKIHRLKVQMQ
QTESPEKVGINGRPVKMVPTSEVTKRKVSSVNGAEIVNGSTQRINGASIVKRAAAPAPMK
KQKSKELPPVEDLKVLPSDEGFSWANENYNSVQRSVDVWSFVLSLRVRVFLDNAKWTYVG
GFTEDKQKIRRRGTASWLRECVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPA
FSPKKSKEFIKKELGVPVDLLYKEFEDQPIAAASLGQVHRAILHNGEKVVVKVQRPGLKK
LFDIDLKNLKLIAEYFQKSETLGGPTRDWIGIYEECAKILYEEIDYINEGKNADRFRRDF
RNIKWVRVPLVYWDYTATKVLTLEYVPGIKINQLDLIDARGYSRSRIASRAIEAYLIQIL
RTGFFHADPHPGNLAIDTDEALIYYDFGMMGDIKSFTRERLLGVFYAVYEKDAKKVMQGL
IDLGALQPTGDMSAVRRSVQFFLDNLLNQRPDQQQTLSAIGEDLFAIATDQPFRFPSTFT
FVLRAFSTLEGIGYILDPDFSFPKIAAPYAQELLDLRQKQRSGPQLVQEIRKQADDARTY
TISMPYRVQRIEEIVKQLESGDLKLRVRVLESERAARKATILQMATMYTVIGGTLLNLGV
TFSNQGSQIFANGSFIGAGVFLALFIRSMQRVNKLDKFEKMI

Transcript Sequence

Gene sequence data has not been registered.